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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924560.1_cds_XP_016472890.1_65075
CDS Infomation

[gene=LOC107794859] [db_xref=GeneID:107794859] [protein=polygalacturonase-like] [protein_id=XP_016472890.1] [location=complement(join(15108..15371,16725..17139,17196..17296,18265..18564,19390..19518))] [gbkey=CDS]
Sequence

ATGGATTTGAAATTCAAGGTAAATTTTGCATTATTGGTGTTGCTATTTCTAGCACACTTT
GGGGAATCTCAAACTGGAGTTTTTGATATAACTAAATATGGTGCTAATAGCAATGCAGAT
ATTAGTGAGGCATTGTTGAATGCTTTTAAAGAAGCATGTCAATCAACAAGCCCAAGCACA
ATTGTGATTCCAAAGGGAACATTTACAATGAACCAAGTAAAGCTAGAAGGCCCATGCAAA
TCCCCACTTGAACTTCAAATCCAAGCCACTTTGAAAGCTCCTTCAGATCCTAGCCAACTC
AAGGTTGGTGAATGGTTAACTGTAAATAAAATTGATCAGTTCACCATGTCTGGTGGTGGT
ATTCTTGATGGTCAAGCTGCAGCTGCTTGGGAATGCAAACAATCCAAAAAATGCAATAAA
CTTCCCAATAACTTGAGTTTCAACTCCCTCACAAATTCCACAGTCAAGGACATAACAACA
CTGGACAGCAAATCATTCCATGTCAACGTAAACCAATGCAAAAATCTAACATTCATTCGA
TTCAACGTCAGTGCACCAGCCAACAGCCCAAACACAGATGGAATTCATGTCTCGAGATCG
AGCTCTGTGAATATTACAGATTCAAATTTTTCTACAGGAGATGATTGTATATCAGTTGGT
GATGAAACAGAACAACTTTATATTACTAGAGTTACATGTGGACCTGGACATGGTATTAGT
GTTGGAAGTCTAGGTGGAAATCCAGATGAAAAACCAGTGGTTGGAGTTTTTGTTAGGAAT
TGCACTTTTACTAACACTGATAATGGTGTTAGAATTAAGACATGGCCTGCTTCACATCCT
GGTGTTGTTAATGATGTTCATTTTGAGGATATTATTGTGCAAAATGTTAGCAATCCTGTT
GTCATTGATCAAGTTTATTGCCCATTCAACAAATGCAACAAAGATTTGCCATCACAAGTG
AAGATCAGTAAAGTAAGTTTCCAAAACATAAAGGGAACATCAAGAACTCAAGATGCAGTG
TCACTTCTCTGCAGTAAAGGTGTACCTTGTGAGGGTATTGAAGTTGGAGACATTGATATA
ACTTACAGTGGAAAAGAAGGGCCAGCAAAATCAAGCTGTGAAAATATTAAGCCAAGTTTA
AAAGGCAAACAAAATCCACCTGTTTGCACTGCCACTGCTGCTTCTGCTCCTGCTGCTTCC
TCTTCTTAA

Peptide Sequence

PEP ID

XP_016472890.1
PEP Infomation

PREDICTED: polygalacturonase-like [Nicotiana tabacum]
Sequence

MDLKFKVNFALLVLLFLAHFGESQTGVFDITKYGANSNADISEALLNAFKEACQSTSPST
IVIPKGTFTMNQVKLEGPCKSPLELQIQATLKAPSDPSQLKVGEWLTVNKIDQFTMSGGG
ILDGQAAAAWECKQSKKCNKLPNNLSFNSLTNSTVKDITTLDSKSFHVNVNQCKNLTFIR
FNVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGIS
VGSLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPV
VIDQVYCPFNKCNKDLPSQVKISKVSFQNIKGTSRTQDAVSLLCSKGVPCEGIEVGDIDI
TYSGKEGPAKSSCENIKPSLKGKQNPPVCTATAASAPAASSS

Transcript Sequence

Gene sequence data has not been registered.